BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016C08SP1|AL426983
(908 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1498 1749 0.0
>3x_Contig1498
Length = 12634
Score = 1749 bits (878), Expect = 0.0
Identities = 898/906 (99%), Gaps = 2/906 (0%)
Strand = Plus / Minus
Query: 1 atcaagccagngttagggataaggcctaattttcagttcttctacaccttgaaaaagttc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8874 atcaagccag-gttagggataaggcctaattttcagttcttctacaccttgaaaaagttc 8816
Query: 61 tgtgtgaacaaaggccacttaccgatgtgtaacattttggatacgacgctcaagagctcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8815 tgtgtgaacaaaggccacttaccgatgtgtaacattttggatacgacgctcaagagctcg 8756
Query: 121 tataggaccattcctttgaaggtcaaaattctaaacttacgtgcaaacttgtacaaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8755 tataggaccattcctttgaaggtcaaaattctaaacttacgtgcaaacttgtacaaatta 8696
Query: 181 gcatatcaactacggaaagcacaacaacctaatgaaatcatgagatctcagagtttaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8695 gcatatcaactacggaaagcacaacaacctaatgaaatcatgagatctcagagtttaaaa 8636
Query: 241 atgatcgaacgatttgtgaaggagcatcaacgcgaattgaatttccagaactatatccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8635 atgatcgaacgatttgtgaaggagcatcaacgcgaattgaatttccagaactatatccaa 8576
Query: 301 ttggccatgttagcgtctcgatacaaaggcagatacctatgtgacaaattatttgcaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8575 ttggccatgttagcgtctcgatacaaaggcagatacctatgtgacaaattatttgcaaag 8516
Query: 361 agcattgtgaccagggacccaacggacagtagggctacttatatcatatacaggtcattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8515 agcattgtgaccagggacccaacggacagtagggctacttatatcatatacaggtcattg 8456
Query: 421 cttgcatttttcgtgaggttaaaggagccaaagamatttttatcaactttaaagaagttg 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8455 cttgcatttttcgtgaggttaaaggagccaaagaaatttttatcaactttaaagaagttg 8396
Query: 481 aataacgaatcccatgttatcgtcactaaatatttgttgagtactgtgaaatacaacatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8395 aataacgaatcccatgttatcgtcactaaatatttgttgagtactgtgaaatacaacatc 8336
Query: 541 gcttactttgataaatttmattgtgaggataccaacgcaatgatagtggagtatgagaaa 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 8335 gcttactttgataaatttaattgtgaggataccaacgcaatgatagtggagtatgagaaa 8276
Query: 601 ctacgaaamasatatgcctttaccaagcttgaagggctagatgccatcaaagagttaatg 660
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8275 ctacgaaaaagatatgcctttaccaagcttgaagggctagatgccatcaaagagttaatg 8216
Query: 661 acgtatctaagawaatggttagatcatgaagtatacaagcatcagacttcaacttatcaa 720
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8215 acgtatctaagaaaatggttagatcatgaagtatacaagcatcagacttcaacttatcaa 8156
Query: 721 aaacagttggaactggaaaagcagtatagaaaggcacccaaagaggttgtgaaataggac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8155 aaacagttggaactggaaaagcagtatagaaaggcacccaaagaggttgtgaaataggac 8096
Query: 781 actggcacaacacaagctcaaataaagagctgttaaatatwtttctctgcgtcctcgtct 840
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 8095 actggcacaacacaagctcaaataaagagctgttaaatatatttctctgcgtcctcgtct 8036
Query: 841 taccattgtcatctctccacttgtaaatagaatatcggagagaatgaaaacttaggcctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 8035 taccattgtcatctctccacttgtaaatagaatatcggagagaatgaaaac-taggcctg 7977
Query: 901 acgtat 906
||||||
Sbjct: 7976 acgtat 7971
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5870
Number of Sequences: 1807
Number of extensions: 5870
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)